| Parameter | Value | |-----------|-------| | Cmax (µg mL⁻¹) | 5.2 | | Tmax (h) | 0.75 | | AUC₀‑∞ (µg·h mL⁻¹) | 38 | | t½ (h) | 7.1 | | Oral F (%) | 68 | | Clearance (CL/F, mL min⁻¹ kg⁻¹) | 2.4 | | Volume of distribution (Vd/F, L kg⁻¹) | 4.1 |
To overcome these limitations, we pursued a structure‑based design strategy targeting a unique hydrophobic pocket adjacent to the ATP‑binding site of PI3K‑δ. The resulting compound, IBZ‑959z (chemical name: ‑(4‑(4‑fluorophenyl)‑2‑pyrimidinyl)-2‑(3‑pyridyl)‑1‑pyrrolidine‑carboxamide), exhibits a novel heterocyclic core that confers high potency and isoform selectivity.
4‑Fluorobenzaldehyde (10 mmol) was condensed with 2‑aminopyrimidine (10 mmol) in ethanol (30 mL) under reflux for 6 h to afford intermediate A (85 % yield).
PI3K‑δ inhibition; IBW‑959z; targeted therapy; B‑cell lymphoma; small‑molecule inhibitor; pre‑clinical development 1. Introduction The phosphoinositide 3‑kinase (PI3K) signalling axis regulates cell growth, survival, and metabolism. Dysregulation of the PI3K pathway is a hallmark of many cancers, with the PI3K‑δ isoform being especially critical in B‑cell development and function (1,2). Clinically approved PI3K‑δ inhibitors (e.g., idelalisib, duvelisib) have demonstrated efficacy in chronic lymphocytic leukaemia (CLL) and follicular lymphoma, yet their therapeutic windows are limited by off‑target toxicities, notably hepatotoxicity and colitis (3,4).
A. Patel¹, J. Liu², M. González³, R. O. Kim⁴, S. H. Lee⁵
Intermediate A (5 mmol) was coupled with (S)‑2‑(3‑pyridyl)‑pyrrolidine‑1‑carboxylic acid using HATU/DIPEA in DMF (0 °C → rt, 4 h) to give IBW‑959z (78 % isolated yield).
Dr. A. Patel, apatel@cam.ac.uk Abstract IBW‑959z is a newly synthesized heterocyclic scaffold designed to target the phosphoinositide 3‑kinase delta (PI3K‑δ) isoform, a validated driver of B‑cell malignancies and certain solid tumours. Here we report the rational design, synthesis, and comprehensive pharmacological profiling of IBW‑959z. In vitro enzymatic assays demonstrated an IC₅₀ of 4.2 nM against PI3K‑δ, with >300‑fold selectivity over PI3K‑α, ‑β, and ‑γ. Cellular assays in diffuse large B‑cell lymphoma (DLBCL) and chronic lymphocytic leukaemia (CLL) cell lines revealed sub‑nanomolar antiproliferative activity (GI₅₀ = 0.12–0.35 nM). Mechanistic studies confirmed on‑target inhibition of AKT phosphorylation (Ser473) and downstream mTOR signalling. In vivo, oral administration of IBW‑959z (10 mg kg⁻¹ daily) achieved >80 % tumour growth inhibition (TGI) in xenograft models of OCI‑Ly3 (DLBCL) and A549 (non‑small‑cell lung carcinoma) without overt toxicity. Pharmacokinetic profiling indicated high oral bioavailability (F ≈ 68 %), a moderate half‑life (t₁/₂ ≈ 7 h), and limited CYP450 inhibition. Together, these data position IBW‑959z as a promising clinical candidate for PI3K‑δ‑driven malignancies.
Figure 2B shows dose‑dependent suppression of phospho‑AKT and phospho‑S6 in OCI‑Ly3 cells, confirming pathway blockade. Key PK parameters are summarized in Table 3 .
¹ Department of Medicinal Chemistry, University of Cambridge, UK ² Institute of Molecular Pharmacology, Shanghai Jiao Tong University, China ³ Cancer Biology Program, Universidad Nacional Autónoma de México, Mexico ⁴ Department of Pharmacology, Seoul National University, South Korea ⁵ Department of Oncology, Johns Hopkins University School of Medicine, USA
Figure 1A (dose‑response curves) illustrates the steep inhibition profile for PI3K‑δ. IBW‑959z inhibited proliferation of PI3K‑δ‑dependent cell lines with GI₅₀ values in the low‑picomolar range (Table 2). In contrast, the PI3K‑α/β‑dependent A549 and MCF‑7 lines were ~100‑fold less sensitive (GI₅₀ ≈ 30–40 nM).
IBW‑959z: A Novel Small‑Molecule Inhibitor of the PI3K‑δ Pathway with Potent Antitumor Activity in Pre‑clinical Models
| Cell line | GI₅₀ (nM) | % Inhibition of p‑AKT (Ser473) at 1 nM | |-----------|----------|----------------------------------------| | OCI‑Ly3 | 0.12 ± 0.02 | 95 % | | MEC‑1 | 0.18 ± 0.03 | 92 % | | A549 | 31 ± 4 | 18 % | | MCF‑7 | 38 ± 5 | 22 % |
Ibw-959z -
| Parameter | Value | |-----------|-------| | Cmax (µg mL⁻¹) | 5.2 | | Tmax (h) | 0.75 | | AUC₀‑∞ (µg·h mL⁻¹) | 38 | | t½ (h) | 7.1 | | Oral F (%) | 68 | | Clearance (CL/F, mL min⁻¹ kg⁻¹) | 2.4 | | Volume of distribution (Vd/F, L kg⁻¹) | 4.1 |
To overcome these limitations, we pursued a structure‑based design strategy targeting a unique hydrophobic pocket adjacent to the ATP‑binding site of PI3K‑δ. The resulting compound, IBZ‑959z (chemical name: ‑(4‑(4‑fluorophenyl)‑2‑pyrimidinyl)-2‑(3‑pyridyl)‑1‑pyrrolidine‑carboxamide), exhibits a novel heterocyclic core that confers high potency and isoform selectivity.
4‑Fluorobenzaldehyde (10 mmol) was condensed with 2‑aminopyrimidine (10 mmol) in ethanol (30 mL) under reflux for 6 h to afford intermediate A (85 % yield).
PI3K‑δ inhibition; IBW‑959z; targeted therapy; B‑cell lymphoma; small‑molecule inhibitor; pre‑clinical development 1. Introduction The phosphoinositide 3‑kinase (PI3K) signalling axis regulates cell growth, survival, and metabolism. Dysregulation of the PI3K pathway is a hallmark of many cancers, with the PI3K‑δ isoform being especially critical in B‑cell development and function (1,2). Clinically approved PI3K‑δ inhibitors (e.g., idelalisib, duvelisib) have demonstrated efficacy in chronic lymphocytic leukaemia (CLL) and follicular lymphoma, yet their therapeutic windows are limited by off‑target toxicities, notably hepatotoxicity and colitis (3,4). IBW-959z
A. Patel¹, J. Liu², M. González³, R. O. Kim⁴, S. H. Lee⁵
Intermediate A (5 mmol) was coupled with (S)‑2‑(3‑pyridyl)‑pyrrolidine‑1‑carboxylic acid using HATU/DIPEA in DMF (0 °C → rt, 4 h) to give IBW‑959z (78 % isolated yield).
Dr. A. Patel, apatel@cam.ac.uk Abstract IBW‑959z is a newly synthesized heterocyclic scaffold designed to target the phosphoinositide 3‑kinase delta (PI3K‑δ) isoform, a validated driver of B‑cell malignancies and certain solid tumours. Here we report the rational design, synthesis, and comprehensive pharmacological profiling of IBW‑959z. In vitro enzymatic assays demonstrated an IC₅₀ of 4.2 nM against PI3K‑δ, with >300‑fold selectivity over PI3K‑α, ‑β, and ‑γ. Cellular assays in diffuse large B‑cell lymphoma (DLBCL) and chronic lymphocytic leukaemia (CLL) cell lines revealed sub‑nanomolar antiproliferative activity (GI₅₀ = 0.12–0.35 nM). Mechanistic studies confirmed on‑target inhibition of AKT phosphorylation (Ser473) and downstream mTOR signalling. In vivo, oral administration of IBW‑959z (10 mg kg⁻¹ daily) achieved >80 % tumour growth inhibition (TGI) in xenograft models of OCI‑Ly3 (DLBCL) and A549 (non‑small‑cell lung carcinoma) without overt toxicity. Pharmacokinetic profiling indicated high oral bioavailability (F ≈ 68 %), a moderate half‑life (t₁/₂ ≈ 7 h), and limited CYP450 inhibition. Together, these data position IBW‑959z as a promising clinical candidate for PI3K‑δ‑driven malignancies. | Parameter | Value | |-----------|-------| | Cmax
Figure 2B shows dose‑dependent suppression of phospho‑AKT and phospho‑S6 in OCI‑Ly3 cells, confirming pathway blockade. Key PK parameters are summarized in Table 3 .
¹ Department of Medicinal Chemistry, University of Cambridge, UK ² Institute of Molecular Pharmacology, Shanghai Jiao Tong University, China ³ Cancer Biology Program, Universidad Nacional Autónoma de México, Mexico ⁴ Department of Pharmacology, Seoul National University, South Korea ⁵ Department of Oncology, Johns Hopkins University School of Medicine, USA
Figure 1A (dose‑response curves) illustrates the steep inhibition profile for PI3K‑δ. IBW‑959z inhibited proliferation of PI3K‑δ‑dependent cell lines with GI₅₀ values in the low‑picomolar range (Table 2). In contrast, the PI3K‑α/β‑dependent A549 and MCF‑7 lines were ~100‑fold less sensitive (GI₅₀ ≈ 30–40 nM). Clinically approved PI3K‑δ inhibitors (e
IBW‑959z: A Novel Small‑Molecule Inhibitor of the PI3K‑δ Pathway with Potent Antitumor Activity in Pre‑clinical Models
| Cell line | GI₅₀ (nM) | % Inhibition of p‑AKT (Ser473) at 1 nM | |-----------|----------|----------------------------------------| | OCI‑Ly3 | 0.12 ± 0.02 | 95 % | | MEC‑1 | 0.18 ± 0.03 | 92 % | | A549 | 31 ± 4 | 18 % | | MCF‑7 | 38 ± 5 | 22 % |
